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RNA analysis involves techniques used to collect data on RNA sequences, which can reveal information about protein structures, mutations, and functional traits. Sequence analysis determines the order of nucleotides in RNA chains, while structural analysis determines the secondary structure of RNA chains. RNA can have various functions, including coding for proteins and serving limited functions within an organism or virus. RNA analysis can help researchers understand how viruses work and develop ways to neutralize them.
RNA analysis is a broad term that refers to a variety of techniques involved in collecting data on a ribonucleic acid (RNA) sequence. Deoxyribonucleic acid (DNA) contains the genetic instructions that dictate nearly every aspect of the appearance and behavior of various parts of an organism. Parts of that DNA are transcribed into RNA, and strands of RNA are then translated into proteins or functional chemical units that are directly or indirectly essential to most chemical and structural aspects of organisms. Some forms of RNA are not translated into proteins but are instead functional due to their chemical properties. RNA analysis is usually intended to read the genetic code contained on a given RNA strand, but it can also be intended to uncover other structural or functional traits.
One of the most common and basic types of RNA analysis is sequence analysis. RNA is made up of four types of molecules known as nucleotides: adenine, guanine, cytosine and uracil. Determining the sequence of nucleotides in such RNA chains allows researchers to predict the structure of a resulting protein or to look for mutations in the sequence. Sequence analysis can also be used to predict the structures of RNA chains that are functional on their own and are not translated into proteins.
Another relatively common form of RNA analysis is structural analysis, which aims to determine the secondary structure of a given RNA chain. The functions of RNA chains that are not translated into proteins emerge from their three-dimensional structures, commonly called secondary structures. Understanding the secondary structure of an RNA chain through RNA structural analysis can help researchers better understand the mechanisms by which the RNA chain works. Structural analysis of RNA can be conducted through computer predictions based on RNA sequencing and through various experimental methods.
RNA can have a variety of functions beyond coding for proteins or serve limited functions within an organism. Some of these functions are evident in certain types of viruses that have RNA genomes, meaning that all of their genetic information is stored as RNA. Such viruses invade host cells and replicate with the help of proteins that can be developed from the RNA genome. Other types of viruses use a process known as reverse transcription to make DNA from RNA. RNA analysis may allow researchers to determine, to some extent, how these viruses work and devise possible ways to neutralize them.
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